Timezone: »
Sample-Efficient Generation of Novel Photo-acid Generator Molecules using a Deep Generative Model
Samuel Hoffman · Vijil Chenthamarakshan · Dmitry Zubarev · Daniel Sanders · Payel Das
Event URL: https://openreview.net/forum?id=_c8SM_V02Y »
Photo-acid generators (PAGs) are compounds that release acids ($H^+$ ions) when exposed to light. These compounds are critical components of the photolithography processes that are used in the manufacture of semiconductor logic and memory chips. The exponential increase in the demand for semiconductors has highlighted the need for discovering novel photo-acid generators. While de novo molecule design using deep generative models has been widely employed for drug discovery and material design, its application to the creation of novel photo-acid generators poses several unique challenges, such as lack of property labels. In this paper, we highlight these challenges and propose a generative modeling approach that utilizes conditional generation from a pre-trained deep autoencoder and expert-in-the-loop techniques. The validity of the proposed approach was evaluated with the help of subject matter experts, indicating the promise of such an approach for applications beyond the creation of novel photo-acid generators.
Photo-acid generators (PAGs) are compounds that release acids ($H^+$ ions) when exposed to light. These compounds are critical components of the photolithography processes that are used in the manufacture of semiconductor logic and memory chips. The exponential increase in the demand for semiconductors has highlighted the need for discovering novel photo-acid generators. While de novo molecule design using deep generative models has been widely employed for drug discovery and material design, its application to the creation of novel photo-acid generators poses several unique challenges, such as lack of property labels. In this paper, we highlight these challenges and propose a generative modeling approach that utilizes conditional generation from a pre-trained deep autoencoder and expert-in-the-loop techniques. The validity of the proposed approach was evaluated with the help of subject matter experts, indicating the promise of such an approach for applications beyond the creation of novel photo-acid generators.
Author Information
Samuel Hoffman (IBM Research)
Vijil Chenthamarakshan (IBM Research)
Dmitry Zubarev
Daniel Sanders
Payel Das (IBM Research)
Related Events (a corresponding poster, oral, or spotlight)
-
2021 : Sample-Efficient Generation of Novel Photo-acid Generator Molecules using a Deep Generative Model »
Tue. Dec 14th 08:40 -- 08:50 PM Room
More from the Same Authors
-
2021 : Accurate Multi-Endpoint Molecular Toxicity Predictions in Humans with Contrastive Explanations »
Bhanushee Sharma · Vijil Chenthamarakshan · Amit Dhurandhar · James Hendler · Jonathan S. Dordick · Payel Das -
2021 : Grapher: Multi-Stage Knowledge Graph Construction using Pretrained Language Models »
Igor Melnyk · Pierre Dognin · Payel Das -
2022 : Reducing Down(stream)time: Pretraining Molecular GNNs using Heterogeneous AI Accelerators »
Jenna A Bilbrey · Kristina Herman · Henry Sprueill · Sotiris Xantheas · Payel Das · Manuel Lopez Roldan · Mike Kraus · Hatem Helal · Sutanay Choudhury -
2022 : Toward Human-AI Co-creation to Accelerate Material Discovery »
Dmitry Zubarev · Carlos Raoni Mendes · Emilio Vital Brazil · Renato Cerqueira · Kristin Schmidt · Vinicius Segura · Juliana Ferreira · Daniel Sanders -
2022 : Consistent Training via Energy-Based GFlowNets for Modeling Discrete Joint Distributions »
Chanakya Ekbote · Moksh Jain · Payel Das · Yoshua Bengio -
2022 : Panel »
Pin-Yu Chen · Alex Gittens · Bo Li · Celia Cintas · Hilde Kuehne · Payel Das -
2022 : SynBench: Task-Agnostic Benchmarking of Pretrained Representations using Synthetic Data »
Ching-Yun Ko · Pin-Yu Chen · Jeet Mohapatra · Payel Das · Luca Daniel -
2022 Expo Demonstration: Real-time Navigation of Chemical Space with Cloud-Based Inference from MoLFormer »
Payel Das · Brian Belgodere -
2021 : Grapher: Multi-Stage Knowledge Graph Construction using Pretrained Language Models »
Igor Melnyk · Pierre Dognin · Payel Das -
2021 Poster: Predicting Deep Neural Network Generalization with Perturbation Response Curves »
Yair Schiff · Brian Quanz · Payel Das · Pin-Yu Chen -
2021 Poster: Mean-based Best Arm Identification in Stochastic Bandits under Reward Contamination »
Arpan Mukherjee · Ali Tajer · Pin-Yu Chen · Payel Das -
2020 : Spotlight: Characterizing the Latent Space of Molecular Generative Models with Persistent Homology Metrics »
Yair Schiff · Payel Das · Vijil Chenthamarakshan · Karthikeyan Natesan Ramamurthy -
2020 Poster: A Decentralized Parallel Algorithm for Training Generative Adversarial Nets »
Mingrui Liu · Wei Zhang · Youssef Mroueh · Xiaodong Cui · Jarret Ross · Tianbao Yang · Payel Das -
2020 : Spotlight on women at IBM Research »
Lisa Amini · Francesca Rossi · Celia Cintas · Payel Das -
2020 Poster: CogMol: Target-Specific and Selective Drug Design for COVID-19 Using Deep Generative Models »
Vijil Chenthamarakshan · Payel Das · Samuel Hoffman · Hendrik Strobelt · Inkit Padhi · Kar Wai Lim · Benjamin Hoover · Matteo Manica · Jannis Born · Teodoro Laino · Aleksandra Mojsilovic -
2020 : CogMol: Target-Specific and Selective Drug Design for COVID-19 Using Deep Generative Models »
Payel Das -
2020 Poster: Optimizing Mode Connectivity via Neuron Alignment »
Norman J Tatro · Pin-Yu Chen · Payel Das · Igor Melnyk · Prasanna Sattigeri · Rongjie Lai -
2020 Expo Talk Panel: AI against COVID-19 at IBM Research »
Divya Pathak · Payel Das · Michal Rosen-Zvi · Salim Roukos -
2018 : Contributed Work »
Thaer Moustafa Dieb · Aditya Balu · Amir H. Khasahmadi · Viraj Shah · Boris Knyazev · Payel Das · Garrett Goh · Georgy Derevyanko · Gianni De Fabritiis · Reiko Hagawa · John Ingraham · David Belanger · Jialin Song · Kim Nicoli · Miha Skalic · Michelle Wu · Niklas Gebauer · Peter Bjørn Jørgensen · Ryan-Rhys Griffiths · Shengchao Liu · Sheshera Mysore · Hai Leong Chieu · Philippe Schwaller · Bart Olsthoorn · Bianca-Cristina Cristescu · Wei-Cheng Tseng · Seongok Ryu · Iddo Drori · Kevin Yang · Soumya Sanyal · Zois Boukouvalas · Rishi Bedi · Arindam Paul · Sambuddha Ghosal · Daniil Bash · Clyde Fare · Zekun Ren · Ali Oskooei · Minn Xuan Wong · Paul Sinz · Théophile Gaudin · Wengong Jin · Paul Leu -
2018 Poster: Explanations based on the Missing: Towards Contrastive Explanations with Pertinent Negatives »
Amit Dhurandhar · Pin-Yu Chen · Ronny Luss · Chun-Chen Tu · Paishun Ting · Karthikeyan Shanmugam · Payel Das