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Workshop: Learning Meaningful Representations of Life (LMRL.org)

Elizabeth Wood, Debora Marks, Thouis Jones, Adji Dieng, Alan Aspuru-Guzik, Anshul Kundaje, Barbara Engelhardt, Chang Liu, Edward Boyden, Kresten Lindorff-Larsen, Mor Nitzan, Smita Krishnaswamy, Wouter Boomsma, Yixin Wang, David Van Valen, Orr Ashenberg

Fri, Dec 11th @ 14:00 GMT – Sat, Dec 12th @ 02:15 GMT
Abstract: This workshop is designed to bring together trainees and experts in machine learning with those in the very forefront of biological research today for this purpose. Our full-day workshop will advance the joint project of the CS and biology communities with the goal of "Learning Meaningful Representations of Life" (LMRL), emphasizing interpretable representation learning of structure and principle. As last year, the workshop will be oriented around four layers of biological abstraction: molecule, cell, synthetic biology, and phenotypes.

Mapping structural molecular detail to organismal phenotype and function; predicting emergent effects of human genetic variation; and designing novel interventions including prevention, diagnostics, therapeutics, and the development of new synthetic biotechnologies for causal investigations are just some of the challenges that hinge on appropriate formal structures to make them accessible to the broadest possible community of computer scientists, statisticians, and their tools.

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Schedule

13:00 – 13:24 GMT
Hilary Finucane
Hilary Finucane
13:24 – 14:00 GMT
Daniela Witten
Daniela M Witten
14:00 – 14:30 GMT
Nuria Lopez-Bigas
Nuria Lopez-Bigas
14:30 – 15:00 GMT
Poster Session I - All Posters
15:00 – 15:15 GMT
Timothy Springer
15:15 – 16:00 GMT
Cell Panel
16:00 – 16:27 GMT
Viviana Gradinaru
Viviana Gradinaru
16:00 – 16:21 GMT
Barak Raveh
Barak Raveh
16:00 – 16:37 GMT
Akiko Iwasaki
Akiko Iwasaki
16:00 – 16:22 GMT
David Ryan Koes
Dave Koes
16:00 – 16:30 GMT
Christina Leslie
Christina Leslie
16:21 – 16:42 GMT
Leeat Keren
Leeat Keren
16:22 – 16:44 GMT
Cecilia Clementi
Cecilia Clementi
16:27 – 17:47 GMT
Sri Kosuri
16:30 – 17:25 GMT
Tamara Broderick
Tamara Broderick
16:37 – 17:18 GMT
Eran Segal
Eran Segal
16:42 – 17:03 GMT
David Zeevi
David Zeevi
16:44 – 17:05 GMT
Pedro Beltrao
Pedro Beltrao
17:03 – 17:30 GMT
Sam Riesenfeld - TBA
Samantha Riesenfeld
17:05 – 17:34 GMT
Christine Peter
Christine Peter
17:07 – 17:47 GMT
Chang Liu
Chang Liu
17:18 – 18:00 GMT
Harlan Krumholz
Harlan Krumholz
17:30 – 18:15 GMT
Juan Caicedo and Shantanu Singh
Shantanu Singh, Juan Caicedo
17:34 – 18:00 GMT
John Chodera
John D Chodera
17:47 – 18:14 GMT
Eli Weinstein
Eli Weinstein
18:00 – 18:06 GMT
Hirunima Jayasekara
Hirunima Jayasekara
18:00 – 18:11 GMT
James Morton
James Morton
18:00 – 19:00 GMT
Phenotype Panel
18:06 – 18:32 GMT
Caroline Weis
Caroline Weis
18:11 – 18:25 GMT
Maria Littmann
Maria Littmann
18:15 – 18:35 GMT
Surojit Biswas
Surge Biswas, Surge Biswas
18:15 – 18:36 GMT
Jesse Bloom
Jesse D Bloom
18:25 – 18:35 GMT
Max Shen
Max Shen
18:32 – 18:36 GMT
Manik Kuchroo
Manik Kuchroo
18:35 – 18:46 GMT
Eli Draizen
Eli Draizen
18:36 – 19:06 GMT
Geoffrey Schiebinger
Geoffrey Schiebinger
18:36 – 18:55 GMT
Claus Hélix-Nielsen
18:46 – 18:57 GMT
Hattie Chung
Hattie Chung
18:55 – 19:25 GMT
Jose Miguel Hernandez Lobato
Jose Miguel Hernández-Lobato
18:57 – 19:07 GMT
Martin Voegele
Martin Voegele
19:10 – 20:10 GMT
David Baker
David Baker
20:10 – 20:45 GMT
Pamela Silver and Debora Marks
20:45 – 22:00 GMT
Poster Session II - All Posters
22:00 – 22:30 GMT
Lin Tian
Lin Tian
22:30 – 23:00 GMT
Kate Adamala
Kate Adamala