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Poster

Scalable kernels for graphs with continuous attributes

Aasa Feragen · Niklas Kasenburg · Jens Petersen · Marleen de Bruijne · Karsten Borgwardt

Harrah's Special Events Center, 2nd Floor

Abstract: While graphs with continuous node attributes arise in many applications, state-of-the-art graph kernels for comparing continuous-attributed graphs suffer from a high runtime complexity; for instance, the popular shortest path kernel scales as O(n4), where n is the number of nodes. In this paper, we present a class of path kernels with computational complexity O(n2(m+δ2)), where δ is the graph diameter and m the number of edges. Due to the sparsity and small diameter of real-world graphs, these kernels scale comfortably to large graphs. In our experiments, the presented kernels outperform state-of-the-art kernels in terms of speed and accuracy on classification benchmark datasets.

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