Multi-scene absolute pose regression has emerged to meet the need for speed and memory efficiency in camera pose estimation in multi-scene real-world scenario. Nowadays, transformer-based model has been devised to regress the camera pose directly in multi-scenes. Despite its potential, transformer encoders are underutilized due to the collapsed self-attention map, having low representation capacity. This work highlights the problem and investigates it from a new perspective: distortion of query-key embedding space. Based on the statistical analysis, we reveal that queries and keys are mapped in completely different spaces while only a few keys are blended into the query region. This leads to the collapse of the self-attention map, as all queries are considered similar to those few keys. Therefore, we propose simple but effective solutions to activate self-attention. Concretely, we present an auxiliary loss that aligns queries and keys, preventing the distortion of query-key space and encouraging the model to find global relations by self-attention. In addition, the fixed sinusoidal positional encoding is adopted instead of undertrained learnable one to reflect appropriate positional clues into the inputs of self-attention. As a result, our approach resolves the aforementioned problem successfully, thus outperforming existing methods in both outdoor and indoor scenes.