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Workshop
Fri Dec 11 06:00 AM -- 06:15 PM (PST)
Learning Meaningful Representations of Life (LMRL.org)
Elizabeth Wood · Debora Marks · Thouis Jones · Adji Bousso Dieng · Alan Aspuru-Guzik · Anshul Kundaje · Barbara Engelhardt · Chang Liu · Edward Boyden · Kresten Lindorff-Larsen · Mor Nitzan · Smita Krishnaswamy · Wouter Boomsma · Yixin Wang · David Van Valen · Orr Ashenberg





Workshop Home Page

There now exists a unique opportunity to unlock the secrets of biological systems at all scales. Mapping structural molecular detail to organismal phenotype and function; predicting emergent effects of human genetic variation; designing novel interventions including prevention, diagnostics, therapeutics, and the development of new synthetic biotechnologies for causal investigations are just some of the challenges that hinge on appropriate formal structures to make them accessible to the broadest possible community of computer scientists, statisticians, and their tools.

This workshop is designed to bring together trainees and experts in machine learning with those in the very forefront of biological research today for this purpose. Our full-day workshop will advance the joint project of the CS and biology communities with the goal of "Learning Meaningful Representations of Life" (LMRL), emphasizing interpretable representation learning of structure and principle. As last year, the workshop will be oriented around five layers of biological abstraction: genome, molecule, cell, synthetic system, and phenotype. This year will have a special talk in each layer dedicated to COVID responses, successful or not, at that level of biological scale from some of the world's foremost experts and first-line responders.

Pamela Silver - TBD (Keynote)
Pam Silver
Suchi Saria - TBD (Opening Remarks)
Suchi Saria
Tamara Broderick - TBD (Opening Remarks)
Tamara Broderick
Daniela Witten - TBD (Opening Remarks)
Daniela M Witten
Synth - David Baker - TBD (Synth Talk)
David Baker
Molecule - David Ryan Koes - TBD (Molecule Talk)
Dave Koes
Cell - Juan Caicedo and Shantanu Singh (Cell Talk)
Shantanu Singh, Juan Caicedo
Synth - Viviana Gradinaru - TBD (Synth Talk)
Viviana Gradinaru
Phenotype - Akiko Iwasaki (Phenotype Talk)
Akiko Iwasaki
Molecule - Cecilia Clementi - TBD (Molecule Talk)
Cecilia Clementi
Cell - Barak Raveh - TBD (Cell Talk)
Barak Raveh
Phenotype - Eran Segal - TBD (Phenotype Talk)
Eran Segal
Cell - Leeat Keren - TBD (Cell Talk)
Leeat Keren
Molecule - Pedro Beltrao - TBD (Molecule Talk)
Pedro Beltrao
Phenotype - Harlan Krumholz - TBD (Phenotype Talk)
Harlan Krumholz
Cell - David Zeevi - TBD (Cell Talk)
David Zeevi
Synth - Lin Tian - TBD (Synth Talk)
Lin Tian
Christine Peter - TBD (Molecule Talk)
Christine Peter
Cell - Jesse Bloom - TBD (Cell Talk)
Jesse D Bloom
Synth - Kate Adamala - TBD (Synth Talk)
Kate Adamala
John Chodera - TBD (Molecule Talk)
John D Chodera
Hirunima Jayasekara - TBD (Phenotype Talk)
Hirunima Jayasekara
Cell - Geoffrey Schiebinger - TBD (Cell Talk)
Geoffrey Schiebinger
Jack Lanchantin - TBD (Phenotype Talk)
Jack Lanchantin
Synth - Eli Weinstein - TBD (Synth Talk)
Eli Weinstein
Cell - Nuria Lopez-Bigas - TBD (Cell Talk)
Nuria Lopez-Bigas
Caroline V Weis - TBD (Phenotype Talk)
Caroline Weis
James T Morton - TBD (Molecule Talk)
James Morton
Maria Littmann - TBD (Molecule Talk)
Maria Littmann
Synth - Surojit Biswas - TBD (Synth Talk)
Surge Biswas, Surge Biswas
Manik Kuchroo - TBD (Phenotype Talk)
Manik Kuchroo
Max Shen - TBD (Molecule Talk)
Max Shen
Jose Miguel Hernandez Lobato - TBD (Synth Talk)
Jose Miguel Hernández-Lobato
Phenotype Panel (Phenotype -- Panel)
Eli Draizen - TBD (Molecule Talk)
Eli Draizen
Sam Riesenfeld - TBA (Cell Talk)
Samantha Riesenfeld
Hattie Chung - TBD (Molecule Talk)
Hattie Chung
Martin Voegele - TBD (Molecule Talk)
Martin Voegele
Poster Session I - All Posters (Poster Session)
Christina Leslie - TBD (Closing Remarks)
Christina Leslie
Hilary Finucane - TBD (Closing Remarks)
Hilary Finucane
Jennifer Listgarten - TBD (Closing Remarks)
Jennifer Listgarten